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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11130344 chr3:53179915 A/G SVOP chr12:109301517-109459045:- -0.34 -5.99 4.92E-9 Box Plot
BLCA rs111320303 chr11:77697406 G/C INTS4L1 chr7:64601603-64694600:+ 0.47 6.6 1.38E-10 Box Plot
BLCA rs11134949 chr5:175346628 A/C LOC728554 chr5:177302262-177311267:+ -0.38 -6.02 4.06E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C ATP6V1B2 chr8:20054878-20084330:+ -0.42 -6.11 2.44E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C CHMP7 chr8:23101150-23119513:+ -0.5 -6.26 1.0E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C CLN8 chr8:1703944-1749877:+ -0.53 -6.07 3.01E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C CNOT7 chr8:17082473-17104387:- -0.56 -6.88 2.5E-11 Box Plot
BLCA rs11137078 chr8:6801955 A/C DCTN6 chr8:30013813-30041156:+ -0.55 -6.65 9.98E-11 Box Plot
BLCA rs11137078 chr8:6801955 A/C ELP3 chr8:27947190-28048673:+ -0.57 -6.59 1.48E-10 Box Plot
BLCA rs11137078 chr8:6801955 A/C FBXO25 chr8:356428-427967:+ -0.51 -6 4.6E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C INTS9 chr8:28625178-28747759:- -0.59 -6.91 2.07E-11 Box Plot
BLCA rs11137078 chr8:6801955 A/C KIAA1967 chr8:22462257-22477981:+ -0.59 -7.17 3.82E-12 Box Plot
BLCA rs11137078 chr8:6801955 A/C LEPROTL1 chr8:29952914-30034724:+ -0.52 -6.01 4.4E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C MTMR9 chr8:11141925-11185655:+ -0.46 -6.1 2.58E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C PCM1 chr8:17780349-17887453:+ -0.47 -6.14 2.11E-9 Box Plot